rs12217742 chr10:13372068 G>A
- Sequence
tgcagatccccactatggccggta[G/A]gaggcagcataacctaatgctctg
- ASB in cell types
- K562 (myelogenous leukemia) WA09 (embryonic stem cells) A549 (lung carcinoma) neutrophils from periferal blood
- ASB for transcription factors
- CTCF_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.18 | 0.33 | 1.55 | -4.85 | Concordant | |||
| REST_HUMAN | 1.02 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
