rs12218474 chr10:71634144 C>T
- Sequence
tccctgctccctgcctggaggcct[C/T]tagagggcctggccagaaagcaga
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- KDM1A_HUMAN CTCF_HUMAN P66B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 2.72 | -0.84 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 2.51 | -2.35 | 1.00 | -3.63 | Concordant | |||
| P66B_HUMAN | 2.56 | n/a | 1.00 | n/a | n/a |
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Motif analysis
