rs12228523 chr12:131896278 A>G
- Sequence
ggagactcctgctcgctggcagtc[A/G]gggccgggccggggcacaggcggc
- ASB in cell types
- 22RV1 (prostate carcinoma) tibial nerve HepG2 (hepatoblastoma)
- ASB for transcription factors
- ANDR_HUMAN FOXK2_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.98 | n/a | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.67 | -2.54 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | -0.33 | 2.41 | 1.17 | 1.20 | Weak Concordant |
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Motif analysis
