rs12233228 chr2:211929986 G>C
- Sequence
tgccttttgctcagttccaggtat[G/C]tgtcaatatttatttttctttagg
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.33 | -0.64 | 2.00 | -0.64 | Weak Concordant |
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Motif analysis
