rs12235087 chr8:88898875 A>G
- Sequence
cctgttctataattattacctagg[A/G]aaaaccaggctatacagagttagg
- ASB in cell types
- 22RV1 (prostate carcinoma) HUES64 (embryonic stem cells) GM12891 (male B- cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.15 | 2.07 | 1.38 | n/a | No Hit | |||
| RAD21_HUMAN | 0.35 | 1.91 | 1.17 | n/a | n/a | |||
| STAG1_HUMAN | 1.58 | 0.26 | 1.33 | n/a | n/a |
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