rs12235552 chr9:114996243 G>A
- Sequence
ccatgttggccaggccggtcttga[G/A]ctcctgctcctggcctcaagtgat
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.21 | -0.12 | 1.55 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.52 | -0.14 | 1.85 | n/a | No Hit |
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