rs12235964 chr9:132355217 G>A
- Sequence
cccgagtccccgtcagggtggacg[G/A]ggagagtttgccgcggaaccttga
- ASB in cell types
- CD14+ monocytes BEAS-2B (bronchial epithelium) adult erythroblasts monocytes from periferal blood
- ASB for transcription factors
- STAT1_HUMAN GCR_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.10 | n/a | 1.50 | n/a | No Hit | |||
| GCR_HUMAN | 1.60 | 0.48 | 1.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.98 | 1.10 | 3.00 | -1.75 | Weak Concordant |
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Motif analysis
