rs12239830 chr1:93811692 G>A

Sequence
cctggcctgtgagcttcttccaca[G/A]gtaatcctggctttctgggttcag
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) -2.45 2.39 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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