rs12240665 chr10:25406723 C>T
- Sequence
ttcttttccatctggcttaatttc[C/T]tttctttacagctggttttcattt
- ASB in cell types
- 22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.49 | -0.08 | 1.50 | 3.19 | Discordant | |||
| FOXA1_HUMAN | n/a | 1.86 | 2.00 | n/a | No Hit |
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Motif analysis
