rs12240802 chr10:79318008 G>C

Sequence
caaaccttcctggcatttcagctg[G/C]agactctgaacctgggatacaggc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) Th1-cells
ASB for transcription factors
TBX21_HUMAN FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN -1.08 1.64 1.004.5·10-3 1.00 n/a No Hit
FOXK2_HUMAN 2.75 n/a 6.8·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP alcohol dependence symptoms birth weight

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