rs12242024 chr10:81786673 A>G
- Sequence
attatctccctacaaatccctgac[A/G]taaggtaaacatggccacattttt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.30 | 1.54 | 1.85 | 0.10 | Weak Concordant | |||
| GATA3_HUMAN | -0.21 | 1.71 | 1.86 | -3.65 | Discordant |
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Motif analysis
