rs12243629 chr10:58952843 C>T
- Sequence
gtcagaggtttcatagtactaccc[C/T]gtagcaccagtagatggcagactc
- ASB in cell types
- LUHMES (lund human mesencephalic cells) WA01 (H1, human embryonic stem cells) SK-N-SH (neuroblastoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.27 | 0.48 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | 1.50 | -0.14 | 1.38 | n/a | n/a |
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