rs12244202 chr10:38526979 T>C
- Sequence
gaatacattggaatgaaatggatt[T/C]gaaaggaatggactggaatggaat
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- LMNA_HUMAN CREB1_HUMAN CTCF_HUMAN ETV6_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| LMNA_HUMAN | n/a | 2.03 | 3.00 | n/a | n/a | |||
| CREB1_HUMAN | n/a | 2.64 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.08 | 1.30 | 2.82 | n/a | No Hit | |||
| ETV6_HUMAN | n/a | 2.55 | 4.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.11 | 3.00 | 2.50 | n/a | No Hit |
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