rs12245661 chr10:32446089 A>T
- Sequence
cagctcacgctcgcagcgtcagcg[A/T]cgccggcggcgccaaggcgtcgtg
- ASB in cell types
- CD14+ monocytes A549 (lung carcinoma)
- ASB for transcription factors
- STAT1_HUMAN TRI22_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.73 | 1.46 | 1.40 | n/a | No Hit | |||
| TRI22_HUMAN | -2.35 | 2.66 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic