rs12246206 chr10:14991707 A>C

Sequence
aggcccttttctttctatcacgct[A/C]catgcacttgaagggttaaaaaga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma)
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 2.54 -1.65 6.8·10-51.00 1.25 n/a n/a
CTCF_HUMAN 2.95 -2.69 1.2·10-41.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

No data available

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