rs12251445 chr10:32056417 T>C
- Sequence
gcccgatcactcctgaggccgccg[T/C]tgggcgacagggcggtgcgggagg
- ASB in cell types
- K562 (myelogenous leukemia) fetal bone marrow-derived mononuclear cells breast tumor primary B-CLL cells
- ASB for transcription factors
- ILF3_HUMAN MEN1_HUMAN CTCF_HUMAN COT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ILF3_HUMAN | -4.99 | 3.38 | 2.00 | n/a | n/a | |||
| MEN1_HUMAN | 3.15 | n/a | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.67 | 1.07 | 1.23 | -0.22 | Weak Discordant | |||
| COT1_HUMAN | -1.95 | 2.39 | 1.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Colon_Transverse, Lung, Prostate, Testis