rs12251531 chr10:111218308 A>G

Sequence
catttttcattgtttttgtgattg[A/G]cttatttcacttggcatagtgagc
ASB in cell types
iPSC (induced pluripotent stem cells) WA01 (H1, human embryonic stem cells)
ASB for transcription factors
DUX4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN 1.94 -1.67 2.6·10-41.00 1.00 1.43 Weak Discordant
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Motif analysis

DUX4_HUMAN Weak Discordant
DUX4_HUMAN pic

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia Brain_Cortex Brain_Nucleus_accumbens_basal_ganglia

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