rs12253538 chr10:3785667 G>A
- Sequence
ccgcgtcgcctgtccccagtcccg[G/A]tctctcttccccgctgcccggtcc
- ASB in cell types
- A549 (lung carcinoma) breast tumor MDA-MB-231 (breast adenocarcinoma) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line)
- ASB for transcription factors
- JUN_HUMAN BRD2_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 0.16 | 1.10 | 1.91 | n/a | No Hit | |||
| BRD2_HUMAN | -0.04 | 1.44 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.05 | -0.35 | 2.50 | n/a | No Hit |
Items per page:
1 – 3 of 3