rs12254856 chr10:88913267 G>A
- Sequence
agttagcccgaggtcaaatgcgaa[G/A]tcagcaaacctcagggctgtcaga
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.72 | -5.14 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, cystatin c in serum, fmri brain tests in schizophrenia, ldl cholesterol, postoperative nausea and vomiting, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood