rs12262023 chr10:84711203 G>T
- Sequence
acgtctggtagtccttggttgttt[G/T]ctcaggcttaagagtcaagtgact
- ASB in cell types
- LHSAR (prostate epithelial cells) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.84 | 0.01 | 1.83 | -4.37 | Concordant | |||
| FOXA1_HUMAN | 1.60 | -3.98 | 2.00 | -3.01 | Concordant |
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Motif analysis
