rs122631 chr19:3097183 C>A
- Sequence
ctagagggtggggccgaggctccc[C/A]ggaaggaaggggctgttgggctgc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ETV5_HUMAN GABP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETV5_HUMAN | 2.42 | -2.26 | 1.00 | 0.22 | Weak Discordant | |||
| GABP1_HUMAN | 2.23 | -3.67 | 1.33 | n/a | n/a |
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Motif analysis
