rs12264320 chr10:4941581 A>T
- Sequence
atgagcagctctatttcatgggcc[A/T]ctttccaaccacctggcactaaag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFE2_HUMAN ZN316_HUMAN ARI1B_HUMAN RING2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFE2_HUMAN | 2.01 | n/a | 2.00 | n/a | No Hit | |||
| ZN316_HUMAN | 1.92 | n/a | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | 2.13 | n/a | 2.00 | n/a | n/a | |||
| RING2_HUMAN | 3.36 | n/a | 2.00 | n/a | n/a | |||
| ZN592_HUMAN | 2.63 | -4.50 | 1.50 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid