rs12267910 chr10:14991572 C>A
- Sequence
cccaaacccagcaaggtggaagct[C/A]gctggtgtcctctgcaatgcttaa
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19099 (female B-cells Lymphoblastoid Cell Lines) MS-1 (Small cell lung carcinoma) esophagus squamous epithelium
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN TF65_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.69 | 0.09 | 1.68 | n/a | No Hit | |||
| STAG1_HUMAN | 1.99 | -0.28 | 2.50 | n/a | n/a | |||
| TF65_HUMAN | 2.04 | -0.39 | 2.17 | -2.35 | Concordant |
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Motif analysis
