rs12274456 chr11:6234754 C>T
- Sequence
tcattggctgagccggaccaaacc[C/T]gagcaaggacgcttgtttcctggc
- ASB in cell types
- adult erythroblasts 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.13 | -1.55 | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 1.83 | -4.51 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood