rs12274841 chr11:71153656 T>C
- Sequence
tcaaggttagagttgcaaaacctt[T/C]gtaaacacctttaaaactgcaaga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) SK-BR-3 (breast adenocarcinoma) LNCaP (prostate carcinoma) MCF7 WS8 cells
- ASB for transcription factors
- ERR1_HUMAN FOXA1_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | 3.45 | -3.96 | 1.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.89 | -0.56 | 1.50 | -2.37 | Concordant | |||
| ESR1_HUMAN | 2.29 | -0.87 | 1.50 | n/a | No Hit |
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Motif analysis
