rs12278540 chr11:362165 T>C
- Sequence
ctcactatgtcccctcagctccta[T/C]ctctgtatggcctggtttttccta
- ASB in cell types
- HCT-116 (colon carcinoma) WA09 (embryonic stem cells)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.45 | -2.00 | 1.11 | n/a | n/a | |||
| CTCF_HUMAN | 1.01 | 0.43 | 1.38 | n/a | No Hit |
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