rs12279445 chr11:105212042 G>A
- Sequence
gcattcaactccagattgcgattt[G/A]tacttgctttataactcatccttg
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.90 | -0.31 | 1.48 | 0.61 | Weak Discordant |
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Motif analysis
