rs12280724 chr11:116742707 G>T

Sequence
tacaattcagaggtttttcacatt[G/T]ctcatggcttcttaagtctaaact
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.66 1.54 1.000.05 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP coronary artery disease (cad),  cystatin c in serum,  hdl cholesterol,  ldl cholesterol,  lp-pla2 activity,  total cholesterol,  total cholesterol change with statins,  triglycerides,  triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Whole_Blood

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