rs12281651 chr11:62508481 C>A
- Sequence
aaagcactctgtggactagaacgc[C/A]ctgtccaaagagaaggccttttca
- ASB in cell types
- GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.95 | -1.04 | 1.00 | n/a | No Hit | |||
| GCR_HUMAN | -1.36 | 1.66 | 1.00 | 1.17 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), hdl cholesterol, mitral annular calcium