rs12286470 chr11:117817802 G>C
- Sequence
tttcctaggaaatcacggcaccgg[G/C]cggaccattcaggagccaggagcc
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.82 | 0.40 | 1.12 | -0.62 | Weak Concordant | |||
| STAG1_HUMAN | 0.07 | 0.66 | 1.00 | n/a | n/a | |||
| TCF21_HUMAN | 0.92 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
