rs12287827 chr11:41309824 A>G
- Sequence
agctcagctattctgccttttacc[A/G]tcacccttacagccttatcttaca
- ASB in cell types
- SK-N-SH (neuroblastoma) GM10847 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.29 | 1.55 | 1.64 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, irritible bowel syndrome, microalbuminuria, mitral annular calcium, refractive error, simpson-angus scale, years of education