rs12403427 chr1:11908513 C>T
- Sequence
accagtggtttttaaccccagcca[C/T]tgagtgatggagggttaccgactc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma) Th2-cells breast tumor
- ASB for transcription factors
- MAF_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAF_HUMAN | 2.46 | -4.97 | 2.75 | n/a | No Hit | |||
| ANDR_HUMAN | 1.73 | -0.20 | 1.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cortex, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Lung, Testis