rs12529 chr10:5094459 C>G

Sequence
gtgacagggaatggattccaaaca[C/G]cagtgtgtaaagctaaatgatggc
ASB in cell types
HepG2 (hepatoblastoma) K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma) 0.01 1.03 1.002.2·10-11 1.15
K562 (myelogenous leukemia) -0.19 1.03 1.003.7·10-6 2.06
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  college completion,  ldl cholesterol change with statins,  simpson-angus scale,  total cholesterol change with statins,  triglycerides,  years of education
GTEx eQTL Esophagus_Mucosa,  Heart_Left_Ventricle,  Liver,  Nerve_Tibial,  Testis

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