rs12564733 chr1:9719230 A>T
- Sequence
tcatccctggagcagaaaagcctg[A/T]gtcagcggctggccgggaggcgta
- ASB in cell types
- HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- MAFK_HUMAN GCR_HUMAN SP130_HUMAN ARI4B_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFK_HUMAN | 2.00 | -1.25 | 1.50 | -1.54 | Weak Concordant | |||
| GCR_HUMAN | 1.03 | 0.40 | 1.00 | n/a | No Hit | |||
| SP130_HUMAN | 2.21 | -1.88 | 1.00 | n/a | n/a | |||
| ARI4B_HUMAN | 2.49 | -2.10 | 1.00 | n/a | n/a |
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Motif analysis
