rs12610635 chr19:16003831 G>A
- Sequence
tcttctggagtgaataaatgcagt[G/A]tttatttttctttaatttctgcct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.04 | -0.35 | 2.26 | n/a | No Hit | |||
| FOXA1_HUMAN | 2.13 | -0.57 | 2.00 | -1.02 | Weak Concordant |
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Motif analysis
