rs12611196 chr19:13168008 T>C

Sequence
gggaggccactaaagtctgcgcgc[T/C]gccttccacgcgttctccagacac
ASB in cell types
MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line)
ASB for transcription factors
CDN1B_HUMAN JUN_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CDN1B_HUMAN 2.24 -1.92 0.021.00 2.33 n/a n/a
JUN_HUMAN 1.63 -0.31 0.041.00 2.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia

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