rs12613605 chr2:43131771 G>T
- Sequence
ggcagtcttcgtgccagatgctat[G/T]gctgtccacagtggccctgcccct
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) neutrophils from periferal blood breast tumor
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN STAT1_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.84 | 1.42 | 1.14 | n/a | n/a | |||
| SMC3_HUMAN | 0.56 | 1.34 | 1.13 | n/a | n/a | |||
| STAT1_HUMAN | 2.04 | n/a | 3.00 | n/a | No Hit | |||
| TIF1B_HUMAN | n/a | 2.69 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4