rs12613876 chr2:189488040 T>G

Sequence
agttaggtaggtcagtcagtcagt[T/G]taaagcagatgtgctggctggaca
ASB for transcription factors
FOXA1_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 0.09 0.85 1.003.4·10-3 1.59 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  diabetic retinopathy in type 2 diabetes mellitus,  infant head circumference
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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