rs12614560 chr2:42199862 A>G
- Sequence
gtatcagggaagtgaaagtcatct[A/G]tgggttattgtggaatcatggaaa
- ASB in cell types
- THP-1 (acute monocytic leukemia) monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.03 | 2.17 | 1.90 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, amyotrophic lateral sclerosis (als), birth weight, diastolic blood pressure (dbp), ldl cholesterol, obesity with early age of onset (age >2), systolic blood pressure (sbp), waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid