rs12618253 chr2:177930112 G>A
- Sequence
agcttattcttaattcaattgatc[G/A]attaattatgtgaaattcaacagc
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.49 | -0.17 | 1.98 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.27 | -0.11 | 1.94 | n/a | No Hit |
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