rs12619684 chr2:170435603 A>G
- Sequence
ttcagttctcaggtctactgcgat[A/G]taacttaatcttgtaacagatgaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN SKIL_HUMAN RUNX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -1.95 | 2.25 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -1.40 | 2.10 | 1.25 | n/a | n/a | |||
| SKIL_HUMAN | n/a | 2.92 | 1.00 | n/a | n/a | |||
| RUNX3_HUMAN | -2.34 | 2.29 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | -1.66 | 2.18 | 1.00 | 0.95 | Weak Concordant |
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Motif analysis
