rs12619735 chr2:170141921 G>A

Sequence
attaattggtatcatcctgaagaa[G/A]aagcttcctttttaagaacattac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ELF1_HUMAN KAISO_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ELF1_HUMAN 2.82 -2.71 3.0·10-31.00 1.00 n/a No Hit
KAISO_HUMAN 2.36 -2.38 0.031.00 1.00 n/a No Hit
IKZF2_HUMAN 1.46 -1.06 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP autism hdl cholesterol height resistance to kuru in aged women despite likely exposure years of education
GTEx eQTL Pituitary

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