rs12620839 chr2:33134390 C>T
- Sequence
ttgaggacacaagagtttattcac[C/T]gctaggtgcacggccaaccccttt
- ASB in cell types
- thoracic aorta HCASMC (Human coronary artery smooth muscle cells) HASM2 (Human airway smooth muscle 2)
- ASB for transcription factors
- CTCF_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.66 | -1.23 | 1.00 | -2.99 | Concordant | |||
| TCF21_HUMAN | 1.61 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
