rs12621138 chr2:171521535 T>A
- Sequence
gaaccggtccatggtcggtcttct[T/A]atcatgaaaaagttcctgaaatca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- REST_HUMAN LEF1_HUMAN SOX6_HUMAN MTG16_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 1.21 | n/a | 1.50 | n/a | No Hit | |||
| LEF1_HUMAN | 3.29 | -0.50 | 1.00 | n/a | No Hit | |||
| SOX6_HUMAN | 2.50 | -2.18 | 1.00 | n/a | No Hit | |||
| MTG16_HUMAN | 1.63 | -2.90 | 1.50 | n/a | n/a | |||
| REQU_HUMAN | 2.08 | 0.13 | 1.00 | n/a | n/a |
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