rs12622347 chr2:101759213 G>A
- Sequence
cagtagactataaggggtcattca[G/A]ttaggttaggcttttctctctgtg
- ASB in cell types
- K562 (myelogenous leukemia) Detroit 562 (Pharyngeal squamous cell carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- TF65_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 1.50 | 0.81 | 1.60 | n/a | No Hit | |||
| ARI1B_HUMAN | -4.89 | 2.82 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Muscle_Skeletal, Pancreas, Skin_Sun_Exposed_Lower_leg, Whole_Blood