rs12624334 chr20:54195346 T>C
- Sequence
cttcatcagattcaaccctgttct[T/C]gtccagttttatcaaaatgtataa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | -1.94 | 2.03 | 4.00 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, childhood acute lymphoblastic leukemia, homa-b, parkinsons disease, schizophrenia