rs12625407 chr20:33933426 A>C

Sequence
atttttccctacaaatgctgagcc[A/C]ctcccacaggattaccaaccacct
ASB in cell types
GM12892 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12892 (female B-cells lymphoblastoid cell line) -0.88 1.04 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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