rs12626967 chr21:41779969 A>G

Sequence
aacacagtgataacaaatccaaat[A/G]ttatttcaattgagatcttatcat
ASB in cell types
LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) HS-SY-2(Monophasic synovial sarcoma)
ASB for transcription factors
FOXA1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.65 0.23 2.2·10-61.00 1.89 n/a No Hit
ANDR_HUMAN 1.57 -0.30 0.021.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease rheumatoid arthritis
GTEx eQTL Muscle_Skeletal

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