rs12631656 chr3:58423336 T>C
- Sequence
aacaatttcattcatcagttgtta[T/C]tgtgtagaaccaatgaacatgttg
- ASB in cell types
- HUES64 (embryonic stem cells) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | n/a | 2.40 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP college completion, height, infant head circumference, ldl cholesterol, rheumatoid arthritis, total cholesterol, years of education
GTEx eQTL Artery_Coronary, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid