rs12642596 chr4:90642063 C>T
- Sequence
gcaacataacaggtatacagcaga[C/T]ggcaccctgcagaatctccaagga
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | n/a | 2.74 | 4.00 | 2.12 | Concordant |
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Motif analysis
